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1

Evaluation of infrared techniques for the assessment of biomass and biofuel quality parameters and conversion technology processes: A review

Chadwick, Dara T., McDonnell, Kevin P., Brennan, Liam P., Fagan, Colette C., Everard, Colm D.

Journal:

Renewable and Sustainable Energy Reviews

Year:

2014

Language:

english

File:

PDF, 1.22 MB

english, 2014

2

High-grade sarcoma diagnosis and prognosis: Biomarker discovery by mass spectrometry imaging

Lou, Sha, Balluff, Benjamin, de Graaff, Marieke A., Cleven, Arjen H.G., Briaire - de Bruijn, Inge, Bovée, Judith V.M.G., McDonnell, Liam A.

Journal:

Year:

2016

Language:

english

File:

PDF, 891 KB

english, 2016

3

A theoretical investigation of the kinetic energy of ions trapped in a radio-frequency hexapole ion trap

McDonnell, Liam, Giannakopulos, Anastassios, Derrick, Peter, Tsybin, Youri, Håkansson, Per

Journal:

European Journal of Mass Spectrometry

Year:

2002

Language:

english

File:

PDF, 504 KB

english, 2002

4

Probing Excitons, Trions and Dark Excitons in Monolayer WS 2 using Resonance Raman Spectroscopy

McDonnell, Liam, Huang, Chung-Che, Cui, Qingsong, Hewak, Daniel W., Smith, David C

Journal:

Year:

2018

Language:

english

File:

PDF, 4.67 MB

english, 2018

5

Characterisation of degraded proteins in paintings using bottom-up proteomic approaches: new strategies for protein digestion and analysis of data

Orsini, Sibilla, Yadav, Avinash, Dilillo, Marialaura, McDonnell, Liam A., Bonaduce, Ilaria

Journal:

Analytical Chemistry

Year:

2018

Language:

english

File:

PDF, 631 KB

english, 2018

6

Gas-phase reaction dynamics studied by ion imaging

McDonnell, Liam, Heck, Albert J. R.

Journal:

Journal of Mass Spectrometry

Year:

1998

Language:

english

File:

PDF, 1.45 MB

english, 1998

7

Subcellular imaging mass spectrometry of brain tissue

Liam A. McDonnell, Sander R. Piersma, A. F. Maarten Altelaar, Todd H. Mize, Stefan L. Luxembourg, Peter D. E. M. Verhaert, Jan van Minnen, Ron M. A. Heeren

Journal:

Journal of Mass Spectrometry

Year:

2005

Language:

english

File:

PDF, 418 KB

english, 2005

8

Imaging mass spectrometry

Liam A. McDonnell, Ron M.A. Heeren

Journal:

Mass Spectrometry Reviews

Year:

2007

Language:

english

File:

PDF, 1.73 MB

english, 2007

9

Design and performance of a new FT-ICR cell operating at a temperature range of 77–438 K

Xinghua Guo, Marc Duursma, Ahmed Al-Khalili, Liam A. McDonnell, Ron M.A. Heeren

Journal:

International Journal of Mass Spectrometry

Year:

2004

Language:

english

File:

PDF, 256 KB

english, 2004

10

SIMION analysis of a high performance linear accumulation octopole with enhanced ejection capabilities

Ioana M. Taban, Liam A. McDonnell, Andreas Römpp, Iliya Cerjak, Ron M.A. Heeren

Journal:

International Journal of Mass Spectrometry

Year:

2005

Language:

english

File:

PDF, 381 KB

english, 2005

11

Fast and automated large-area imaging MALDI mass spectrometry in microprobe and microscope mode

Leendert A. Klerk, A.F. Maarten Altelaar, Martin Froesch, Liam A. McDonnell, Ron M.A. Heeren

Journal:

International Journal of Mass Spectrometry

Year:

2009

Language:

english

File:

PDF, 1.38 MB

english, 2009

12

Mass spectrometry in demonstrating the site-specific nitration of hen egg white lysozyme by an improved electrochemical method

Dominic Matters, Helen J. Cooper, Liam McDonnell, Jesus Iniesta, John Heptinstall, Peter Derrick, David Walton, Ian Peterson

Journal:

Analytical Biochemistry

Year:

2006

Language:

english

File:

PDF, 375 KB

english, 2006

13

Quality of surface: The influence of sample preparation on MS-based biomolecular tissue imaging with MALDI-MS and (ME-)SIMS

Ron M.A. Heeren, Başak Kükrer-Kaletaş, Ioana M. Taban, Luke MacAleese, Liam A. McDonnell

Journal:

Applied Surface Science

Year:

2008

Language:

english

File:

PDF, 869 KB

english, 2008

14

Electron capture dissociation at low temperatures reveals selective dissociations

Romulus Mihalca, Anne J. Kleinnijenhuis, Liam A. McDonnell, Albert J.R. Heck, Ron M.A. Heeren

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2004

Language:

english

File:

PDF, 181 KB

english, 2004

15

Higher Sensitivity Secondary Ion Mass Spectrometry of Biological Molecules for High Resolution, Chemically Specific Imaging

Liam A. McDonnell, Ron M.A. Heeren, Robert P.J. de Lange, Ian W. Fletcher

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2006

Language:

english

File:

PDF, 481 KB

english, 2006

16

Imaging Mass Spectrometry Data Reduction: Automated Feature Identification and Extraction

Liam A. McDonnell, Alexandra van Remoortere, Nico de Velde, René J.M. van Zeijl, André M. Deelder

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2010

Language:

english

File:

PDF, 2.52 MB

english, 2010

17

Automated imaging MS: Toward high throughput imaging mass spectrometry

Liam A. McDonnell, Alexandra van Remoortere, René J.M. van Zeijl, Hans Dalebout, Marco R. Bladergroen, André M. Deelder

Journal:

Journal of Proteomics

Year:

2010

Language:

english

File:

PDF, 690 KB

english, 2010

18

Peptide and protein imaging mass spectrometry in cancer research

Liam A. McDonnell, Garry L. Corthals, Stefan M. Willems, Alexandra van Remoortere, René J.M. van Zeijl, André M. Deelder

Journal:

Journal of Proteomics

Year:

2010

Language:

english

File:

PDF, 4.48 MB

english, 2010

19

Imaging mass spectrometry of myxoid sarcomas identifies proteins and lipids specific to tumour type and grade, and reveals biochemical intratumour heterogeneity

Stefan M Willems, Alexandra van Remoortere, René van Zeijl, André M Deelder, Liam A McDonnell, Pancras CW Hogendoorn

Journal:

The Journal of Pathology

Year:

2010

Language:

english

File:

PDF, 410 KB

english, 2010

20

Nitromatrix provides improved LC-MALDI signals and more protein identifications

Petri Kouvonen, Liam A. McDonnell, Ron M. A. Heeren, Garry L. Corthals

Journal:

Year:

2009

Language:

english

File:

PDF, 468 KB

english, 2009

21

Combined infrared multiphoton dissociation and electron-capture dissociation using co-linear and overlapping beams in Fourier transform ion cyclotron resonance mass spectrometry

Romulus Mihalca, Yuri E. M. van der Burgt, Liam A. McDonnell, Marc Duursma, Iliya Cerjak, Albert J. R. Heck, Ron M. A. Heeren

Journal:

Rapid Communications in Mass Spectrometry

Year:

2006

Language:

english

File:

PDF, 245 KB

english, 2006

22

An External Matrix-Assisted Laser Desorption Ionization Source for Flexible FT-ICR Mass Spectrometry Imaging with Internal Calibration on Adjacent Samples

Donald F. Smith, Konstantin Aizikov, Marc C. Duursma, Frans Giskes, Dirk-Jan Spaanderman, Liam A. McDonnell, Peter B. O’Connor, Ron M. A. Heeren

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2011

Language:

english

File:

PDF, 519 KB

english, 2011

23

High-resolution MALDI imaging mass spectrometry allows localization of peptide distributions at cellular length scales in pituitary tissue sections

A.F. Maarten Altelaar, Ioana M. Taban, Liam A. McDonnell, Peter D.E.M. Verhaert, Robert P.J. de Lange, Roger A.H. Adan, Wolter J. Mooi, Ron M.A. Heeren, Sander R. Piersma

Journal:

International Journal of Mass Spectrometry

Year:

2007

Language:

english

File:

PDF, 1.10 MB

english, 2007

24

Imaging of Peptides in the Rat Brain Using MALDI-FTICR Mass Spectrometry

Ioana M. Taban, A.F. Maarten Altelaar, Yuri E.M. van der Burgt, Liam A. McDonnell, Ron M.A. Heeren, Jens Fuchser, Gökhan Baykut

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2007

Language:

english

File:

PDF, 2.32 MB

english, 2007

25

Automated, Feature-Based Image Alignment for High-Resolution Imaging Mass Spectrometry of Large Biological Samples

Alexander Broersen, Robert van Liere, A.F. Maarten Altelaar, Ron M.A. Heeren, Liam A. McDonnell

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2008

Language:

english

File:

PDF, 4.04 MB

english, 2008

26

MALDI Imaging and Profiling MS of Higher Mass Proteins from Tissue

Alexandra van Remoortere, René J.M. van Zeijl, Nico van den Oever, Julien Franck, Rémi Longuespée, Maxence Wisztorski, Michel Salzet, André M. Deelder, Isabelle Fournier, Liam A. McDonnell

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2010

Language:

english

File:

PDF, 1.02 MB

english, 2010

27

Imaging mass spectrometry at cellular length scales

Altelaar, A F Maarten, Luxembourg, Stefan L, McDonnell, Liam A, Piersma, Sander R, Heeren, Ron M A

Journal:

Nature Protocols

Year:

2007

Language:

english

File:

PDF, 701 KB

english, 2007

28

Determination of the Nature of Naphthenic Acids Present in Crude Oils Using Nanospray Fourier Transform Ion Cyclotron Resonance Mass Spectrometry: The Continued Battle Against Corrosion

Barrow, Mark P., McDonnell, Liam A., Feng, Xidong, Walker, Jérémie, Derrick, Peter J.

Journal:

Analytical Chemistry

Year:

2003

Language:

english

File:

PDF, 245 KB

english, 2003

29

MALDI-TOF-MS analysis of sialylated glycans and glycopeptides using 4-chloro-α-cyanocinnamic acid matrix

Maurice H. J. Selman, Marcus Hoffmann, Gerhild Zauner, Liam A. McDonnell, Crina I. A. Balog, Erdmann Rapp, André M. Deelder, Manfred Wuhrer

Journal:

Year:

2012

Language:

english

File:

PDF, 1.20 MB

english, 2012

30

High Speed Data Processing for Imaging MS-Based Molecular Histology Using Graphical Processing Units

Emrys A. Jones, René J. M. van Zeijl, Per E. Andrén, André M. Deelder, Lex Wolters, Liam A. McDonnell

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2012

Language:

english

File:

PDF, 744 KB

english, 2012

31

Tools and strategies for visualization of large image data sets in high-resolution imaging mass spectrometry

Klinkert, Ivo, McDonnell, Liam A., Luxembourg, Stefan L., Maarten Altelaar, A. F., Amstalden, Erika R., Piersma, Sander R., Heeren, Ron M. A.

Journal:

Review of Scientific Instruments

Year:

2007

Language:

english

File:

PDF, 889 KB

english, 2007

32

5-methylthiopentose: a new substituent on lipoarabinomannan in Mycobacterium tuberculosis

Achim Treumann, Feng Xidong, Liam McDonnell, Peter J Derrick, Alison E Ashcroft, Delphi Chatterjee, Steve W Homans

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 343 KB

english, 2002

33

Going forward: Increasing the accessibility of imaging mass spectrometry

Liam A. McDonnell, Ron M.A. Heeren, Per E. Andrén, Markus Stoeckli, Garry L. Corthals

Journal:

Journal of Proteomics

Year:

2012

Language:

english

File:

PDF, 701 KB

english, 2012

34

Preface

Liam McDonnell, Per E. Andrén, Garry L. Corthals

Journal:

Journal of Proteomics

Year:

2012

Language:

english

File:

PDF, 254 KB

english, 2012

35

Imaging mass spectrometry to visualize biomolecule distributions in mouse brain tissue following hemispheric cortical spreading depression

Emrys A. Jones, Reinald Shyti, René J.M. van Zeijl, Sandra H. van Heiningen, Michel D. Ferrari, André M. Deelder, Else A. Tolner, Arn M.J.M. van den Maagdenberg, Liam A. McDonnell

Journal:

Journal of Proteomics

Year:

2012

Language:

english

File:

PDF, 1.52 MB

english, 2012

36

Imaging mass spectrometry statistical analysis

Emrys A. Jones, Sören-Oliver Deininger, Pancras C.W. Hogendoorn, André M. Deelder, Liam A. McDonnell

Journal:

Journal of Proteomics

Year:

2012

Language:

english

File:

PDF, 3.81 MB

english, 2012

37

A novel peptidomics approach to detect markers of Alzheimer’s disease in cerebrospinal fluid

Dorien Wijte, Liam A. McDonnell, Crina I.A. Balog, Koen Bossers, André M. Deelder, Dick F. Swaab, Joost Verhaagen, Oleg A. Mayboroda

Journal:

Year:

2012

Language:

english

File:

PDF, 1.21 MB

english, 2012

38

Immunoglobulin G Glycopeptide Profiling by Matrix-Assisted Laser Desorption Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

Selman, Maurice H. J., McDonnell, Liam A., Palmblad, Magnus, Ruhaak, L. Renee, Deelder, André M., Wuhrer, Manfred

Journal:

Analytical Chemistry

Year:

2010

Language:

english

File:

PDF, 558 KB

english, 2010

39

Carbon dioxide utilisation ofDunaliella tertiolectafor carbon bio-mitigation in a semicontinuous photobioreactor

Farrelly, Damien J., Brennan, Liam, Everard, Colm D., McDonnell, Kevin P.

Journal:

Applied Microbiology and Biotechnology

Year:

2014

Language:

english

File:

PDF, 298 KB

english, 2014

40

Automatic Registration of Mass Spectrometry Imaging Data Sets to the Allen Brain Atlas

Abdelmoula, Walid M., Carreira, Ricardo J., Shyti, Reinald, Balluff, Benjamin, van Zeijl, René J. M., Tolner, Else A., Lelieveldt, Boudewijn F. P., van den Maagdenberg, Arn M. J. M., McDonnell, Liam A

Journal:

Analytical Chemistry

Year:

2014

Language:

english

File:

PDF, 4.45 MB

english, 2014

41

30μm spatial resolution protein MALDI MSI: In-depth comparison of five sample preparation protocols applied to human healthy and atherosclerotic arteries

Martin-Lorenzo, Marta, Balluff, Benjamin, Sanz-Maroto, Aroa, van Zeijl, René J.M., Vivanco, Fernando, Alvarez-Llamas, Gloria, McDonnell, Liam A.

Journal:

Journal of Proteomics

Year:

2014

Language:

english

File:

PDF, 805 KB

english, 2014

42

Infrared Mass Spectrometric Imaging below the Diffraction Limit

Luxembourg, Stefan L., McDonnell, Liam A., Mize, Todd H., Heeren, Ron M. A.

Journal:

Journal of Proteome Research

Year:

2005

Language:

english

File:

PDF, 110 KB

english, 2005

43

Mass Spectrometry Image Correlation: Quantifying Colocalization

McDonnell, Liam A., van Remoortere, Alexandra, van Zeijl, René J. M., Deelder, André M.

Journal:

Journal of Proteome Research

Year:

2008

Language:

english

File:

PDF, 7.43 MB

english, 2008

44

MSiMass List: A Public Database of Identifications for Protein MALDI MS Imaging

McDonnell, Liam A., Walch, Axel, Stoeckli, Markus, Corthals, Garry L.

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 1.88 MB

english, 2014

45

Using Matrix Peaks To Map Topography: Increased Mass Resolution and Enhanced Sensitivity in Chemical Imaging

McDonnell, Liam A., Mize, Todd H., Luxembourg, Stefan L., Koster, Sander, Eijkel, Gert B., Verpoorte, Elisabeth, de Rooij, Nico F., Heeren, Ron M. A.

Journal:

Analytical Chemistry

Year:

2003

Language:

english

File:

PDF, 1.13 MB

english, 2003

46

High-Spatial Resolution Mass Spectrometric Imaging of Peptide and Protein Distributions on a Surface

Luxembourg, Stefan L., Mize, Todd H., McDonnell, Liam A., Heeren, Ron M. A.

Journal:

Analytical Chemistry

Year:

2004

Language:

english

File:

PDF, 736 KB

english, 2004

47

Effect of Local Matrix Crystal Variations in Matrix-Assisted Ionization Techniques for Mass Spectrometry

Luxembourg, Stefan L., McDonnell, Liam A., Duursma, Marc C., Guo, Xinghua, Heeren, Ron M. A.

Journal:

Analytical Chemistry

Year:

2003

Language:

english

File:

PDF, 676 KB

english, 2003

48

An experimental study of the gas-phase reactions of the NO3 radical with pent-1-ene, hex-1-ene and hept-1-ene

Canosa-Mas, Carlos E., King, Martin D., McDonnell, Liam, Wayne, Richard P.

Journal:

Physical Chemistry Chemical Physics

Year:

1999

Language:

english

File:

PDF, 114 KB

english, 1999

49

Towards imaging metabolic pathways in tissues

Dekker, Tim J. A., Jones, Emrys A., Corver, Willem E., van Zeijl, René J. M., Deelder, André M., Tollenaar, Rob A. E. M., Mesker, Wilma E., Morreau, Hans, McDonnell, Liam A.

Journal:

Analytical and Bioanalytical Chemistry

Year:

2015

Language:

english

File:

PDF, 2.16 MB

english, 2015

50

Discussion point: reporting guidelines for mass spectrometry imaging

McDonnell, Liam A., Römpp, Andreas, Balluff, Benjamin, Heeren, Ron M. A., Albar, Juan Pablo, Andrén, Per E., Corthals, Garry L., Walch, Axel, Stoeckli, Markus

Journal:

Analytical and Bioanalytical Chemistry

Year:

2015

Language:

english

File:

PDF, 3.84 MB

english, 2015